Lead-DBS
  • Home
  • About
    • Quickstart Primer (Post-OP MR-Scans)
    • Data & Code inclusion philosophy
    • Quickstart Primer (Post-OP CT-Scans)
    • Deep Brain Stimulation
    • Lead Connectome
    • Publications
    • List of Lead-DBS dependencies
    • Citing Lead-DBS
  • News
  • Contact
  • Help/Support
    • Manual
    • Knowledge Base
      • Atlases/Resources
        • Subcortical Atlases (MNI-Space)
        • Cortical Atlas Parcellations (MNI-Space)
        • Macaque Atlases (MNI-Space)
        • The DISTAL atlas
        • FEM-based VTA model
        • Normative Connectomes
      • Lead-DBS Methods
        • Subcortical Electrophysiology Mapping (SEM)
        • AC/PC to MNI conversion
        • Connectivity Benefit Mapping
      • Other Videos
      • Screenshots
      • Walkthrough-Videos
    • Slack User Channel
    • Forum
  • Workshops
    • Past workshops
      • Berlin 2016
      • Shanghai September 2018
      • Hamburg February 2019
    • Berlin September 2019
    • Machine Learning – Berlin September 2019
    • Brisbane February 2020
  • Download
  • Lead-Connectome
  • Search
  • Menu Menu

PaCER method

You are here: Home1 / Forums2 / Support forum ARCHIVED – Please use Slack Channel instead3 / PaCER method4
Viewing 3 posts - 1 through 3 (of 3 total)
  • Author
    Posts
  • 07/11/2017 at 1:20 AM #2892
    Vinny
    Participant

    Hi,
    The PaCER method for pre-reconstruction of electrode trajectories gives the following message (TRAC/CORE method works fine):

    Thanks,
    Vinny

    ans =
    rpostop_ct.nii
    Undefined function or variable ‘PaCER’.
    Error in ea_autocoord (line 184)
    elecmodels=PaCER([options.root,options.patientname,filesep,options.prefs.ctnii_coregistered],’finalDegree’,1,’electrodeType’,ea_mod2pacermod(options.elmodel));
    Error in ea_run (line 95)
    ea_autocoord(options);
    Error in lead_dbs>run_button_Callback (line 201)
    ea_run(‘run’,options);
    Error in gui_mainfcn (line 95)
    feval(varargin{:});
    Error in lead_dbs (line 43)
    gui_mainfcn(gui_State, varargin{:});
    Error in
    matlab.graphics.internal.figfile.FigFile/read>@(hObject,eventdata)lead_dbs(‘run_button_Callback’,hObject,eventdata,guidata(hObject))
    Error while evaluating UIControl Callback

    07/11/2017 at 7:55 AM #2893
    andreashorn
    Keymaster

    Hi Vinny,

    the PaCER method is not published and what you’re seeing is just an interface to it that we are developing. You seem to be using Lead-DBS in “Dev-Mode”. Please open your preferences files and set prefs.env.dev=0.
    It can sometimes be risky to use dev mode for a productive system since also other parts of the code could then be rooted to code that is unstable or sometimes even wrong. So I really would not advise you to do so :)

    Best, Andy

    07/11/2017 at 1:13 PM #2894
    Vinny
    Participant

    Thanks Andy!

  • Author
    Posts
Viewing 3 posts - 1 through 3 (of 3 total)
  • The forum ‘Support forum ARCHIVED – Please use Slack Channel instead’ is closed to new topics and replies.

Your Account

Log In
Register

Forum Statistics

Registered Users
129
Forums
1
Topics
185
Replies
607
Topic Tags
81

Subscribe to our newsletter

Latest Tweets

  • Tweet Avatar
    leaddbs
    @leaddbs
    RT @MarcCoutanche: Sharing my response to a recent review request from Nature Neuroscience. If you submit to a Nature journal, your se… https://t.co/bvxXH27RdV

    12h
  • Tweet Avatar
    leaddbs
    @leaddbs
    @DrPhilipMosley Thanks Phil!

    2d
  • Tweet Avatar
    leaddbs
    @leaddbs
    RT @DrPhilipMosley: It gets bigger and better! https://t.co/j1eQ409hnN

    2d

Recent Posts

  • Lead-DBS on the cover of NeuroImage
  • Lead-DBS on the cover of Biological Psychiatry
  • Lead-DBS on the cover of Annals of Neurology
  • Crucial methodological updates for Lead-DBS
  • 2nd Lead-DBS Workshop in Shanghai, China

Archives

  • September 2020
  • June 2019
  • November 2018
  • September 2018
  • August 2018
  • March 2018
  • November 2017
  • September 2017
  • July 2017
  • April 2017
  • July 2016
  • June 2016
  • May 2016
  • March 2016
  • December 2015
  • November 2015
  • April 2015
  • January 2015
  • December 2014
  • October 2014
  • September 2014
  • July 2014
  • June 2014

Impressum & Datenschutzerklärung

Scroll to top