Mask for electrodes and trajectory

[elliot.c.brown]

Hi,

Is it possible to export a mask image (.nii) of the the reconstructed electrode and trajectory in standard space so that I can use it to remove potential artifact of the lesioning from electrode insertion in functional images?

Thanks

[andreashorn]

Hi elliot,

currently, there’s no function for that. You can export the trajectories to surface formats via the [Tools] [Export] options. Then probably there’s some way out there to convert to nifti (maybe 3D slicer can do it?).
A few users have asked for this already, so we might end up doing it at some point. But I fear it’s not high priority currently.

Best, Andy

[Author]

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